Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDHA1Pyruvate dehydrogenase E1 alpha 1 subunit. (390 aa)    
Predicted Functional Partners:
DLAT
Dihydrolipoamide S-acetyltransferase.
  
 0.999
DLD
Dihydrolipoamide dehydrogenase.
  
 0.999
PDHX
Pyruvate dehydrogenase complex component X.
  
 0.999
PDHB
Pyruvate dehydrogenase E1 beta subunit.
 
 0.999
PDK3
Pyruvate dehydrogenase kinase 3.
    
 0.996
PDK1
Pyruvate dehydrogenase kinase 1.
    
 0.996
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
 
 0.992
PDK2
Pyruvate dehydrogenase kinase 2.
   
 0.987
PDK4
Pyruvate dehydrogenase kinase 4.
    
 0.982
GPI
Glucose-6-phosphate isomerase.
  
 
 0.975
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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