STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF622Zinc finger protein 622. (473 aa)    
Predicted Functional Partners:
EIF6
Eukaryotic translation initiation factor 6.
   
 0.995
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 0.982
NMD3
NMD3 ribosome export adaptor.
   
 
 0.979
RPL23A
Ribosomal protein L23a.
   
 0.976
GNL2
G protein nucleolar 2.
   
 0.976
RSL24D1
Ribosomal L24 domain containing 1.
   
 0.976
MAK16
MAK16 homolog.
 
 
 
  0.974
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 0.972
ZNF593
Zinc finger protein 593.
   
 
 0.971
RPF1
Ribosome production factor 1 homolog.
   
 
 0.961
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.