STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZNF622Zinc finger protein 622. (473 aa)    
Predicted Functional Partners:
NMD3
NMD3 ribosome export adaptor.
   
 
 0.956
RSL24D1
Ribosomal L24 domain containing 1.
   
 
 0.955
LSG1
Large 60S subunit nuclear export GTPase 1.
   
 
 0.946
EBNA1BP2
EBNA1 binding protein 2.
   
 0.941
HECTD1
HECT domain E3 ubiquitin protein ligase 1.
    
 
 0.928
EIF6
Eukaryotic translation initiation factor 6.
   
 
 0.914
RRS1
Ribosome biogenesis regulator 1 homolog.
   
 
 0.903
MRTO4
MRT4 homolog, ribosome maturation factor.
   
 0.897
MAK16
MAK16 homolog.
 
 
 
 0.891
ENSCWAP00000017988
annotation not available
      
 0.887
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.