STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
BCAS1Breast carcinoma amplified sequence 1. (569 aa)    
Predicted Functional Partners:
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.846
FANCM
FA complementation group M.
    
 0.786
KMT2C
Lysine methyltransferase 2C.
   
 
 0.759
ASH1L
ASH1 like histone lysine methyltransferase.
   
 
 0.753
KMT2B
Lysine methyltransferase 2B.
   
 
 0.681
ENSCWAP00000009217
annotation not available
   
 
 0.681
BCL2L14
BCL2 like 14.
   
    0.681
PLP1
Proteolipid protein 1.
   
  
 0.677
SETDB2
SET domain bifurcated histone lysine methyltransferase 2.
  
  
 0.664
ENSCWAP00000028343
annotation not available
    
 0.659
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.