STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
APOBApolipoprotein B. (4562 aa)    
Predicted Functional Partners:
MTTP
Microsomal triglyceride transfer protein.
   
 0.999
LDLR
Low density lipoprotein receptor.
    
 0.998
APOA2
Apolipoprotein A2.
   
 0.997
APOE
Apolipoprotein E.
   
 0.994
APOC3
Apolipoprotein C3.
   
 
 0.992
APOC2
Apolipoprotein C2.
   
 0.983
VLDLR
Very low density lipoprotein receptor.
    
 0.978
LRP8
LDL receptor related protein 8.
    
 0.965
P4HB
Prolyl 4-hydroxylase subunit beta.
    
 0.961
APOA1
Apolipoprotein A1.
   
 0.956
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.