STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SYS1SYS1 golgi trafficking protein. (156 aa)    
Predicted Functional Partners:
ARFRP1
ADP ribosylation factor related protein 1.
   
 
 0.971
TMF1
TATA element modulatory factor 1.
     
 0.866
ARL1
ADP ribosylation factor like GTPase 1.
     
  0.833
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
     
 0.830
COG7
Component of oligomeric golgi complex 7.
     
 0.791
VPS53
VPS53 subunit of GARP complex.
     
 0.775
VPS52
VPS52 subunit of GARP complex.
     
 0.774
VPS51
VPS51 subunit of GARP complex.
     
 0.774
COG5
Component of oligomeric golgi complex 5.
     
 0.769
GCC1
GRIP and coiled-coil domain containing 1.
     
 0.694
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.