STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TFAP4Transcription factor AP-4. (338 aa)    
Predicted Functional Partners:
BPTF
Bromodomain PHD finger transcription factor.
    
 
 0.951
FBXW11
F-box and WD repeat domain containing 11.
    
   0.944
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
   0.928
CDKN1A
Cyclin dependent kinase inhibitor 1A.
    
 0.902
ZNF35
Zinc finger protein 35.
    
 
 0.866
CDKN1B
Cyclin dependent kinase inhibitor 1B.
    
 0.832
ENSCWAP00000018770
annotation not available
    
 0.832
SCMH1
Scm polycomb group protein homolog 1.
      
 0.797
CABIN1
Calcineurin binding protein 1.
    
   0.796
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
    
   0.795
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.