Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GYS1Glycogen synthase 1. (737 aa)    
Predicted Functional Partners:
GBE1
1,4-alpha-glucan branching enzyme 1.
   
 0.999
GYG1
Glycogenin 1.
   
 0.996
GYG2
Glycogenin 2.
   
 0.990
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
  
 0.987
PRKAB2
Protein kinase AMP-activated non-catalytic subunit beta 2.
   
 0.981
PPP1R3C
Protein phosphatase 1 regulatory subunit 3C.
   
 0.980
GSK3B
Glycogen synthase kinase 3 beta.
   
 0.977
PPP1R3D
Protein phosphatase 1 regulatory subunit 3D.
   
 0.972
PRKAB1
Protein kinase AMP-activated non-catalytic subunit beta 1.
   
 0.969
PPP1R3A
Protein phosphatase 1 regulatory subunit 3A.
   
 0.960
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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