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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSGIN1Oxidative stress induced growth inhibitor 1. (478 aa)    
Predicted Functional Partners:
ARID4B
AT-rich interaction domain 4B.
    
 0.743
TONSL
Tonsoku like, DNA repair protein.
   
 0.731
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
  0.647
ARID4A
AT-rich interaction domain 4A.
    
 0.642
ENSCWAP00000021437
annotation not available
   
  
 0.640
GPR107
G protein-coupled receptor 107.
      
 0.626
LIN52
Lin-52 DREAM MuvB core complex component.
      
 0.620
TGFB1
Transforming growth factor beta 1.
    
 0.615
ILKAP
ILK associated serine/threonine phosphatase.
    
 0.610
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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