Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ZC3H12CZinc finger CCCH-type containing 12C. (884 aa)    
Predicted Functional Partners:
ZNF641
Zinc finger protein 641.
   
    0.841
ZC3H12B
Zinc finger CCCH-type containing 12B.
   
    0.723
ZFAT
Zinc finger and AT-hook domain containing.
   
  
 0.699
MAGI2
Membrane associated guanylate kinase, WW and PDZ domain containing 2.
      
 0.699
KBTBD3
Kelch repeat and BTB domain containing 3.
   
  
 0.684
KCNB1
Potassium voltage-gated channel subfamily B member 1.
   
  
 0.632
IKBKG
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.621
ENSCWAP00000019878
annotation not available
    
 
 0.613
MYO3B
Myosin IIIB.
      
 0.600
OPTN
Optineurin.
    
  0.596
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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