Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DPH2Diphthamide biosynthesis 2. (489 aa)    
Predicted Functional Partners:
DPH1
Diphthamide biosynthesis 1.
   
0.999
EEF2
Eukaryotic translation elongation factor 2.
    
 0.988
DPH5
Diphthamide biosynthesis 5.
   
 0.978
ENSCWAP00000001002
annotation not available
   
 0.973
ENSCWAP00000012718
annotation not available
   
 0.973
DPH3
Diphthamide biosynthesis 3.
   
 0.973
DDX56
DEAD-box helicase 56.
   
 
 0.815
DDX31
DEAD-box helicase 31.
   
   0.810
RRP9
Ribosomal RNA processing 9, U3 small nucleolar RNA binding protein.
   
    0.807
DNAJC24
DnaJ heat shock protein family (Hsp40) member C24.
   
 
 0.789
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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