Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TTC38Tetratricopeptide repeat domain 38. (469 aa)    
Predicted Functional Partners:
CDA
Cytidine deaminase.
    
   0.777
FAM118A
Family with sequence similarity 118 member A.
      
 0.697
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
      
 0.609
MANSC4
MANSC domain containing 4.
      
 0.607
CLIP3
CAP-Gly domain containing linker protein 3.
      
 0.589
DDX28
DEAD-box helicase 28.
      
 0.587
ZCCHC17
Zinc finger CCHC-type containing 17.
      
 0.586
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
      
 0.585
LRIT2
Leucine rich repeat, Ig-like and transmembrane domains 2.
      
 0.585
KIAA1958
KIAA1958.
      
 0.584
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.