Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSX2Msh homeobox 2. (267 aa)    
Predicted Functional Partners:
MSX1
Msh homeobox 1.
   
 0.990
MAGED1
MAGE family member D1.
    
 
 0.912
ENSCWAP00000000973
annotation not available
     
  0.867
FGF18
Fibroblast growth factor 18.
      
 0.832
FGF3
Fibroblast growth factor 3.
      
 0.832
RUNX2
RUNX family transcription factor 2.
    
 0.812
DLX5
Distal-less homeobox 5.
    
 0.793
FGF4
Fibroblast growth factor 4.
      
 0.760
IRF3
Interferon regulatory factor 3.
      
 0.741
BMP7
Bone morphogenetic protein 7.
      
 0.737
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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