Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ICAM1Intercellular adhesion molecule 1. (537 aa)    
Predicted Functional Partners:
ITGB2
Integrin subunit beta 2.
   
 0.998
ITGAL
Integrin subunit alpha L.
    
 0.997
RELA
RELA proto-oncogene, NF-kB subunit.
   
 0.993
NFKB1
Nuclear factor kappa B subunit 1.
   
 0.990
ITGAM
Integrin subunit alpha M.
   
 0.988
ITGB1
Integrin subunit beta 1.
   
 0.980
ITGAX
Integrin subunit alpha X.
   
 0.976
ITGB7
Integrin subunit beta 7.
   
 0.969
RELB
RELB proto-oncogene, NF-kB subunit.
   
 0.968
REL
REL proto-oncogene, NF-kB subunit.
   
 0.957
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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