Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SRLSarcalumenin. (473 aa)    
Predicted Functional Partners:
RYR1
Ryanodine receptor 1.
   
  
 0.934
UNC45B
Unc-45 myosin chaperone B.
   
  
 0.922
MYOM2
Myomesin 2.
   
  
 0.919
RBSN
Rabenosyn, RAB effector.
    
 0.918
SMYD1
SET and MYND domain containing 1.
   
  
 0.905
KLHL41
Kelch like family member 41.
   
  
 0.861
SYNPO2L
Synaptopodin 2 like.
   
    0.841
CASQ2
Calsequestrin 2.
   
 
 0.840
WDFY4
WDFY family member 4.
     
 0.824
ENSCWAP00000012064
annotation not available
   
 
 0.793
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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