STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKDREJPolycystin family receptor for egg jelly. (2248 aa)    
Predicted Functional Partners:
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
    
0.936
PKD2
Polycystin 2, transient receptor potential cation channel.
    
0.936
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
0.936
MYOT
Myotilin.
    
 0.917
CCDC25
Coiled-coil domain containing 25.
    
 0.804
ODF2L
Outer dense fiber of sperm tails 2 like.
    
 
 0.723
ODF4
Outer dense fiber of sperm tails 4.
      
 0.703
CBY2
Chibby family member 2.
    
 
 0.701
TRRAP
Transformation/transcription domain associated protein.
    
  0.690
CDPF1
Cysteine rich DPF motif domain containing 1.
 
    
 0.682
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.