STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKDREJPolycystin family receptor for egg jelly. (2248 aa)    
Predicted Functional Partners:
PKD2L2
Polycystin 2 like 2, transient receptor potential cation channel.
    
 0.939
PKD2
Polycystin 2, transient receptor potential cation channel.
    
 0.919
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
    
 0.919
MYOT
Myotilin.
    
 0.808
PRKD2
Protein kinase D2.
    
 
 0.808
PRKD3
Protein kinase D3.
    
 
 0.808
PRKD1
Protein kinase D1.
    
 
 0.808
CCDC25
Coiled-coil domain containing 25.
    
 0.782
ENSCWAP00000019409
annotation not available
      
 0.754
NPHP1
Nephrocystin 1.
    
 
 0.721
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.