STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEMD3LEM domain containing 3. (749 aa)    
Predicted Functional Partners:
SMAD1
SMAD family member 1.
    
 
 0.937
ENSCWAP00000017881
annotation not available
   
 0.865
LMNA
Lamin A/C.
    
 0.851
BANF2
Barrier to autointegration factor 2.
   
 0.833
ENSCWAP00000010919
annotation not available
    
 
 0.830
SMAD3
SMAD family member 3.
    
 
 0.830
ENSCWAP00000027610
annotation not available
    
 
 0.830
CDC5L
Cell division cycle 5 like.
   
 
 0.822
LMNB1
Lamin B1.
    
 0.817
LMNB2
Lamin B2.
    
 0.817
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.