Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LEMD3LEM domain containing 3. (749 aa)    
Predicted Functional Partners:
SMAD9
SMAD family member 9.
    
 0.994
SMAD1
SMAD family member 1.
    
 0.994
SMAD5
SMAD family member 5.
    
 0.988
SMAD3
SMAD family member 3.
    
 0.982
ENSCWAP00000010919
annotation not available
    
 0.973
ENSCWAP00000027610
annotation not available
    
 0.973
ENSCWAP00000017881
annotation not available
    
 0.963
BANF2
Barrier to autointegration factor 2.
    
 0.943
LMNA
Lamin A/C.
    
 0.937
LMNB1
Lamin B1.
    
 0.915
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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