Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATP6V1FNBATP6V1F neighbor. (176 aa)    
Predicted Functional Partners:
TEX49
Testis expressed 49.
  
 
   0.903
TEKT5
Tektin 5.
    
 
 0.867
ENSCWAP00000026214
annotation not available
    
   0.867
TEX43
Testis expressed 43.
    
   0.861
ENKUR
Enkurin, TRPC channel interacting protein.
    
   0.861
SPAG8
Sperm associated antigen 8.
    
   0.861
C1orf158
Chromosome 1 open reading frame 158.
    
   0.861
FAM183A
Family with sequence similarity 183 member A.
    
   0.861
EFHB
EF-hand domain family member B.
    
   0.861
C4orf45
Chromosome 4 open reading frame 45.
    
   0.861
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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