STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDPF1Cysteine rich DPF motif domain containing 1. (123 aa)    
Predicted Functional Partners:
ATXN10
Ataxin 10.
      
 0.628
PKDREJ
Polycystin family receptor for egg jelly.
      
 0.584
DNLZ
DNL-type zinc finger.
      
 0.583
WDR89
WD repeat domain 89.
      
 0.519
ENSCWAP00000017407
annotation not available
      
 0.485
ENSCWAP00000028312
annotation not available
      
 0.430
LMLN
Leishmanolysin like peptidase.
      
 0.419
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.