Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADAM2ADAM metallopeptidase domain 2. (732 aa)    
Predicted Functional Partners:
ADAM30
ADAM metallopeptidase domain 30.
    
 0.745
ADAM20
ADAM metallopeptidase domain 20.
    
 0.718
SPAM1
Sperm adhesion molecule 1.
   
 
 0.663
SH3PXD2A
SH3 and PX domains 2A.
    
 0.649
ENSCWAP00000016637
annotation not available
    
 0.623
PDILT
Protein disulfide isomerase like, testis expressed.
    
 
 0.612
C9orf116
Chromosome 9 open reading frame 116.
   
  
 0.609
LGI1
Leucine rich glioma inactivated 1.
    
 0.603
CLGN
Calmegin.
    
 
 0.603
ADAM10
ADAM metallopeptidase domain 10.
     
 0.598
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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