Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX19Sorting nexin 19. (993 aa)    
Predicted Functional Partners:
CABS1
Calcium binding protein, spermatid associated 1.
      
 0.807
PPT2
Palmitoyl-protein thioesterase 2.
      
 0.754
PATZ1
POZ/BTB and AT hook containing zinc finger 1.
      
 0.696
INSL6
Insulin like 6.
      
 0.696
BBS9
Bardet-Biedl syndrome 9.
      
 0.694
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
      
 0.677
SNX10
Sorting nexin 10.
     
 0.676
MAP3K12
Mitogen-activated protein kinase kinase kinase 12.
      
 0.645
TBX5
T-box transcription factor 5.
      
 0.642
SNX7
Sorting nexin 7.
      
 0.615
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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