STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCWAP00000005863annotation not available (98 aa)    
Predicted Functional Partners:
PXMP4
Peroxisomal membrane protein 4.
      
 0.760
TMEM115
Transmembrane protein 115.
      
 0.523
CCDC25
Coiled-coil domain containing 25.
      
 0.501
SLC16A7
Solute carrier family 16 member 7.
      
 0.487
ST6GALNAC3
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3.
      
 0.441
ST6GALNAC4
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4.
      
 0.441
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.