STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPSB1splA/ryanodine receptor domain and SOCS box containing 1. (273 aa)    
Predicted Functional Partners:
ELOC
Elongin C.
    
 0.961
ASB18
Ankyrin repeat and SOCS box containing 18.
     
 0.843
CUL5
Cullin 5.
    
 0.822
MYCBP2
MYC binding protein 2.
    
 
 0.820
SKP1
S-phase kinase associated protein 1.
    
 0.817
ASB10
Ankyrin repeat and SOCS box containing 10.
     
 0.793
RNF7
Ring finger protein 7.
    
 0.719
CUL1
Cullin 1.
   
 0.717
CUL3
Cullin 3.
    
 0.706
CACUL1
CDK2 associated cullin domain 1.
    
 0.700
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.