STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPSB1splA/ryanodine receptor domain and SOCS box containing 1. (273 aa)    
Predicted Functional Partners:
CUL5
Cullin 5.
    
 0.939
ELOC
Elongin C.
    
 0.934
SKP1
S-phase kinase associated protein 1.
    
 0.876
PAWR
Pro-apoptotic WT1 regulator.
    
   0.832
NOS2
Nitric oxide synthase 2.
    
 
 0.826
MYCBP2
MYC binding protein 2.
    
 
 0.818
SPSB3
splA/ryanodine receptor domain and SOCS box containing 3.
     
 0.785
TTC1
Tetratricopeptide repeat domain 1.
    
   0.779
RNF7
Ring finger protein 7.
    
 0.767
ENSCWAP00000014943
annotation not available
    
 0.765
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.