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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HSD17B10Hydroxysteroid 17-beta dehydrogenase 10. (261 aa)    
Predicted Functional Partners:
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
    
 0.996
ENSCWAP00000028312
annotation not available
    
 0.996
ECHS1
enoyl-CoA hydratase, short chain 1.
   
 0.991
RPP38
Ribonuclease P/MRP subunit p38.
   
 
  0.973
TARBP2
TARBP2 subunit of RISC loading complex.
    
  0.973
EHHADH
enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase.
   
 0.969
DHX9
DExH-box helicase 9.
     
 0.966
LAS1L
LAS1 like ribosome biogenesis factor.
   
 
  0.965
RPP40
Ribonuclease P/MRP subunit p40.
   
 
  0.957
HADHB
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
   
 0.954
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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