Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
THSD1Thrombospondin type 1 domain containing 1. (853 aa)    
Predicted Functional Partners:
CKAP2
Cytoskeleton associated protein 2.
  
   
 0.890
VPS36
Vacuolar protein sorting 36 homolog.
      
 0.856
GCC2
GRIP and coiled-coil domain containing 2.
      
 0.754
NPHP1
Nephrocystin 1.
      
 0.598
ASTN2
Astrotactin 2.
      
 0.570
ENSCWAP00000021643
annotation not available
      
 0.564
ENSCWAP00000021704
annotation not available
      
 0.564
ENSCWAP00000007459
annotation not available
      
 0.557
TRIQK
Triple QxxK/R motif containing.
      
 0.544
POFUT2
Protein O-fucosyltransferase 2.
     
 0.541
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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