STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC138Coiled-coil domain containing 138. (647 aa)    
Predicted Functional Partners:
CCDC14
Coiled-coil domain containing 14.
    
 
 0.813
CCDC186
Coiled-coil domain containing 186.
      
 0.810
PCM1
Pericentriolar material 1.
    
   0.799
RABL6
RAB, member RAS oncogene family like 6.
      
 0.754
VPS53
VPS53 subunit of GARP complex.
      
 0.754
CCDC22
Coiled-coil domain containing 22.
      
 0.743
AKAP9
A-kinase anchoring protein 9.
    
   0.741
PIBF1
Progesterone immunomodulatory binding factor 1.
   
 
 0.727
VPS52
VPS52 subunit of GARP complex.
      
 0.695
VPS51
VPS51 subunit of GARP complex.
      
 0.694
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.