Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PSMD1Proteasome 26S subunit, non-ATPase 1. (946 aa)    
Predicted Functional Partners:
PSMD14
Proteasome 26S subunit, non-ATPase 14.
   
 0.999
PSMD13
Proteasome 26S subunit, non-ATPase 13.
   
 0.999
PSMD3
Proteasome 26S subunit, non-ATPase 3.
   
 0.999
PSMD8
Proteasome 26S subunit, non-ATPase 8.
   
 0.999
PSMD7
Proteasome 26S subunit, non-ATPase 7.
   
 0.999
PSMD4
Proteasome 26S subunit, non-ATPase 4.
   
 0.999
PSMC1
Proteasome 26S subunit, ATPase 1.
   
 0.999
PSMC5
Proteasome 26S subunit, ATPase 5.
   
 0.999
PSMC6
Proteasome 26S subunit, ATPase 6.
   
 0.999
PSMC3
Proteasome 26S subunit, ATPase 3.
   
 0.999
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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