STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A29Solute carrier family 25 member 29. (305 aa)    
Predicted Functional Partners:
SLC25A20
Solute carrier family 25 member 20.
     
  0.890
WDR25
WD repeat domain 25.
      
 0.730
MRPL57
Mitochondrial ribosomal protein L57.
      
 0.593
SNRK
SNF related kinase.
      
 0.589
MPP5
Membrane palmitoylated protein 5.
      
 0.589
FSTL5
Follistatin like 5.
      
 0.586
PRPF39
pre-mRNA processing factor 39.
      
 0.584
SLC25A48
Solute carrier family 25 member 48.
     
  0.580
SLC25A45
Solute carrier family 25 member 45.
     
  0.580
MRPS21
Mitochondrial ribosomal protein S21.
      
 0.576
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.