STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2E3Ubiquitin conjugating enzyme E2 E3. (207 aa)    
Predicted Functional Partners:
ENSCWAP00000007138
annotation not available
   
 0.993
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.972
GCDH
glutaryl-CoA dehydrogenase.
 
 
  0.877
ANAPC4
Anaphase promoting complex subunit 4.
   
 0.859
UBA1
Ubiquitin like modifier activating enzyme 1.
  
 0.853
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 0.849
ENSCWAP00000002555
annotation not available
  
  
0.843
UBE2E2
Ubiquitin conjugating enzyme E2 E2.
  
  
0.839
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.826
TRAF7
TNF receptor associated factor 7.
    
 0.817
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.