Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTGFRProstaglandin F receptor. (362 aa)    
Predicted Functional Partners:
GNA13
G protein subunit alpha 13.
    
  0.897
GNA12
G protein subunit alpha 12.
    
  0.897
AVP
Arginine vasopressin.
    
 0.892
GNA14
G protein subunit alpha 14.
    
 0.890
GNA11
G protein subunit alpha 11.
    
 0.886
GNAQ
G protein subunit alpha q.
    
 0.886
GNAS
GNAS complex locus.
    
  0.884
F2
Coagulation factor II, thrombin.
    
  0.878
OXTR
Oxytocin receptor.
     
 0.876
AGT
Angiotensinogen.
     
  0.874
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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