STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DNMT1DNA methyltransferase 1. (1644 aa)    
Predicted Functional Partners:
UBB
Ubiquitin B.
    
 
 0.999
DNMT3B
DNA methyltransferase 3 beta.
    
 0.998
ENSCWAP00000013538
annotation not available
    
 0.988
EZH2
Enhancer of zeste 2 polycomb repressive complex 2 subunit.
   
 0.988
DNMT3A
DNA methyltransferase 3 alpha.
   
 0.984
UHRF2
Ubiquitin like with PHD and ring finger domains 2.
  
 0.983
H3-3A
H3.3 histone A.
    
 0.981
HDAC1
Histone deacetylase 1.
    
 0.978
USP7
Ubiquitin specific peptidase 7.
   
 
 0.968
PCNA
Proliferating cell nuclear antigen.
   
   0.957
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.