Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CTCFCCCTC-binding factor. (727 aa)    
Predicted Functional Partners:
SUZ12
SUZ12 polycomb repressive complex 2 subunit.
   
 0.901
NPM1
Nucleophosmin 1.
    
 
 0.881
PARP1
poly(ADP-ribose) polymerase 1.
    
 
 0.862
STAG1
Stromal antigen 1.
   
 
 0.834
RAD21
RAD21 cohesin complex component.
   
 
 0.823
SMC3
Structural maintenance of chromosomes 3.
   
 
 0.822
SMC1A
Structural maintenance of chromosomes 1A.
   
 
 0.794
PUM3
Pumilio RNA binding family member 3.
    
   0.782
RPL14
Ribosomal protein L14.
    
   0.767
ENSCWAP00000018665
annotation not available
   
  0.748
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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