STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C20orf173Chromosome 20 open reading frame 173. (203 aa)    
Predicted Functional Partners:
C20orf194
Chromosome 20 open reading frame 194.
      
 0.693
CDC42SE2
CDC42 small effector 2.
      
 0.537
UQCC1
Ubiquinol-cytochrome c reductase complex assembly factor 1.
      
 0.535
SPAG4
Sperm associated antigen 4.
      
 0.500
TECTA
Tectorin alpha.
     
  0.484
SNED1
Sushi, nidogen and EGF like domains 1.
     
  0.474
CT83
Cancer/testis antigen 83.
  
   
 0.438
ERGIC3
ERGIC and golgi 3.
      
 0.422
CXCL16
C-X-C motif chemokine ligand 16.
  
     0.410
HEMGN
Hemogen.
  
   
 0.400
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.