STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TPM2Tropomyosin 2. (284 aa)    
Predicted Functional Partners:
TNNI3
Troponin I3, cardiac type.
   
 0.972
TNNT2
Troponin T2, cardiac type.
   
 0.970
TNNI1
Troponin I1, slow skeletal type.
   
 0.916
TNNT1
Troponin T1, slow skeletal type.
   
 0.915
MYL1
Myosin light chain 1.
   
 0.901
TNNI2
Troponin I2, fast skeletal type.
   
 0.895
TNNT3
Troponin T3, fast skeletal type.
   
 0.872
SMIM20
Small integral membrane protein 20.
   
 0.844
TFG
Trafficking from ER to golgi regulator.
   
 0.844
ACTA1
Actin alpha 1, skeletal muscle.
   
 0.839
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.