Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PPP1R21Protein phosphatase 1 regulatory subunit 21. (779 aa)    
Predicted Functional Partners:
C12orf4
Chromosome 12 open reading frame 4.
    
 
 0.986
GATD1
Glutamine amidotransferase like class 1 domain containing 1.
    
   0.947
RSPH3
Radial spoke head 3.
    
   0.932
CRYZL1
Crystallin zeta like 1.
    
   0.892
DTNB
Dystrobrevin beta.
    
   0.869
DTNA
Dystrobrevin alpha.
    
   0.869
HMX3
H6 family homeobox 3.
    
   0.798
TBCK
TBC1 domain containing kinase.
   
 
 0.797
HDLBP
High density lipoprotein binding protein.
    
   0.770
AQP10
Aquaporin 10.
    
   0.759
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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