STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CICCapicua transcriptional repressor. (2518 aa)    
Predicted Functional Partners:
ATXN1
Ataxin 1.
    
 
 0.986
MAPK1
Mitogen-activated protein kinase 1.
    
  0.800
MAPK3
Mitogen-activated protein kinase 3.
    
  0.800
MAPK7
Mitogen-activated protein kinase 7.
    
  0.796
PRRC2A
Proline rich coiled-coil 2A.
   
    0.778
PAFAH1B2
Platelet activating factor acetylhydrolase 1b catalytic subunit 2.
      
 0.602
LIMK1
LIM domain kinase 1.
    
 0.601
RBM17
RNA binding motif protein 17.
      
 0.589
NMT2
N-myristoyltransferase 2.
      
 0.584
MAPK13
Mitogen-activated protein kinase 13.
    
  0.581
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.