STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ITGA4Integrin subunit alpha 4. (1033 aa)    
Predicted Functional Partners:
ITGB7
Integrin subunit beta 7.
   
 0.999
ITGB1
Integrin subunit beta 1.
   
 0.999
ITGB2
Integrin subunit beta 2.
   
 0.993
ENSCWAP00000004585
annotation not available
    
 0.991
PXN
Paxillin.
    
 0.985
ENSCWAP00000025659
annotation not available
   
 0.978
ITGAV
Integrin subunit alpha V.
    
0.977
ITGB5
Integrin subunit beta 5.
   
 0.976
LPXN
Leupaxin.
    
 0.975
ITGB8
Integrin subunit beta 8.
    
 0.972
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.