STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GM2AGM2 ganglioside activator. (196 aa)    
Predicted Functional Partners:
ENSCWAP00000006149
annotation not available
   
 0.993
HEXB
Hexosaminidase subunit beta.
   
 0.981
PSAP
Prosaposin.
   
 
 0.791
PSAPL1
Prosaposin like 1 (gene/pseudogene).
   
 
 0.791
OSBPL8
Oxysterol binding protein like 8.
      
 0.786
GLB1
Galactosidase beta 1.
     
 0.781
ETFA
Electron transfer flavoprotein subunit alpha.
      
 0.753
GLB1L
Galactosidase beta 1 like.
     
 0.750
THBS4
Thrombospondin 4.
      
 0.710
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
      
 0.704
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.