Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PAIP2Bpoly(A) binding protein interacting protein 2B. (123 aa)    
Predicted Functional Partners:
UBR5
Ubiquitin protein ligase E3 component n-recognin 5.
    
 
 0.861
PAIP1
poly(A) binding protein interacting protein 1.
    
 
 0.653
EIF4G1
Eukaryotic translation initiation factor 4 gamma 1.
    
 
 0.653
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
    
 
 0.602
ANKRD52
Ankyrin repeat domain 52.
      
 0.588
EIF4G2
Eukaryotic translation initiation factor 4 gamma 2.
    
 
 0.581
EIF3J
Eukaryotic translation initiation factor 3 subunit J.
      
 0.573
LARP4
La ribonucleoprotein 4.
    
 
 0.564
RC3H1
Ring finger and CCCH-type domains 1.
    
   0.536
CCDC69
Coiled-coil domain containing 69.
      
 0.487
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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