STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX10DEAD-box helicase 10. (821 aa)    
Predicted Functional Partners:
ESF1
ESF1 nucleolar pre-rRNA processing protein homolog.
   
 
 0.994
ENSCWAP00000003523
annotation not available
   
 0.992
AATF
Apoptosis antagonizing transcription factor.
   
 
 0.991
NOL10
Nucleolar protein 10.
   
 
 0.991
HEATR1
HEAT repeat containing 1.
   
 0.991
BYSL
Bystin like.
   
 
 0.990
WDR43
WD repeat domain 43.
   
 0.986
UTP3
UTP3 small subunit processome component.
   
 0.985
NOP58
NOP58 ribonucleoprotein.
  
 
 0.985
DDX18
DEAD-box helicase 18.
   
 
 0.985
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.