STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADAMTS8ADAM metallopeptidase with thrombospondin type 1 motif 8. (896 aa)    
Predicted Functional Partners:
HAPLN4
Hyaluronan and proteoglycan link protein 4.
      
 0.691
HAPLN3
Hyaluronan and proteoglycan link protein 3.
      
 0.637
PGAP6
Post-glycosylphosphatidylinositol attachment to proteins 6.
      
 0.605
TSKU
Tsukushi, small leucine rich proteoglycan.
      
 0.601
ADAMTSL3
ADAMTS like 3.
     
0.589
POFUT2
Protein O-fucosyltransferase 2.
     
 0.589
EPDR1
Ependymin related 1.
      
 0.558
ADAMTS16
ADAM metallopeptidase with thrombospondin type 1 motif 16.
   
 
0.556
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
   
 
0.556
ADAMTSL4
ADAMTS like 4.
     
0.556
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.