STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WARS1tryptophanyl-tRNA synthetase 1. (482 aa)    
Predicted Functional Partners:
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.976
WARS2
Tryptophanyl tRNA synthetase 2, mitochondrial.
     
 0.949
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
 
 0.900
SARS1
seryl-tRNA synthetase 1.
  
 
 0.861
MVB12A
Multivesicular body subunit 12A.
    
 
 0.803
MARS1
methionyl-tRNA synthetase 1.
  
  
 0.802
SMCHD1
Structural maintenance of chromosomes flexible hinge domain containing 1.
    
   0.788
CEP41
Centrosomal protein 41.
    
   0.787
TMEM179B
Transmembrane protein 179B.
  
 
 0.779
FARSB
phenylalanyl-tRNA synthetase subunit beta.
  
  
 0.763
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.