Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A8Solute carrier family 38 member 8. (432 aa)    
Predicted Functional Partners:
SLC38A9
Solute carrier family 38 member 9.
      
 0.754
SLC43A1
Solute carrier family 43 member 1.
      
 0.713
LAMTOR2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
    
 0.700
LAMTOR1
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 1.
    
 0.649
GAN
Gigaxonin.
      
 0.646
ENSCWAP00000019315
annotation not available
    
  0.641
SLC13A4
Solute carrier family 13 member 4.
   
  
 0.621
IL4
Interleukin 4.
    
 0.614
RRAGA
Ras related GTP binding A.
    
 0.614
RRAGB
Ras related GTP binding B.
    
 0.614
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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