Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TFB1MTranscription factor B1, mitochondrial. (339 aa)    
Predicted Functional Partners:
POLRMT
RNA polymerase mitochondrial.
   
 0.992
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
    
 
 0.953
BYSL
Bystin like.
   
 
 0.948
RBFA
Ribosome binding factor A.
    
 
 0.937
AURKAIP1
Aurora kinase A interacting protein 1.
    
 
 0.927
TFAM
Transcription factor A, mitochondrial.
   
 0.915
MRPS9
Mitochondrial ribosomal protein S9.
  
 
 0.898
MRPS6
Mitochondrial ribosomal protein S6.
  
 
 0.883
MRPS18B
Mitochondrial ribosomal protein S18B.
   
 
 0.879
DAP3
Death associated protein 3.
   
 
 0.878
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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