STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOP10NOP10 ribonucleoprotein. (64 aa)    
Predicted Functional Partners:
DKC1
Dyskerin pseudouridine synthase 1.
   
 0.999
NHP2
NHP2 ribonucleoprotein.
   
 0.999
GAR1
GAR1 ribonucleoprotein.
   
 0.999
WRAP53
WD repeat containing antisense to TP53.
    
 0.997
ENSCWAP00000018586
annotation not available
   
 0.989
SNU13
Small nuclear ribonucleoprotein 13.
   
 0.987
RPP38
Ribonuclease P/MRP subunit p38.
   
 0.979
TRUB1
TruB pseudouridine synthase family member 1.
   
 0.972
SHQ1
SHQ1, H/ACA ribonucleoprotein assembly factor.
   
 
 0.959
ENSCWAP00000000249
annotation not available
    
 0.957
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.