Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB44Zinc finger and BTB domain containing 44. (616 aa)    
Predicted Functional Partners:
SMYD1
SET and MYND domain containing 1.
    
 
 0.851
ECM1
Extracellular matrix protein 1.
    
 
 0.766
LACTBL1
Lactamase beta like 1.
   
  
 0.626
SERTAD4
SERTA domain containing 4.
    
 
 0.620
FAM49A
Family with sequence similarity 49 member A.
      
 0.616
ITGAM
Integrin subunit alpha M.
      
 0.592
ITGAX
Integrin subunit alpha X.
      
 0.592
SCUBE1
Signal peptide, CUB domain and EGF like domain containing 1.
    
 
 0.591
ZSWIM8
Zinc finger SWIM-type containing 8.
      
 0.588
ENSCWAP00000009385
annotation not available
      
 0.587
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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