STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FKBP1BFKBP prolyl isomerase 1B. (108 aa)    
Predicted Functional Partners:
RYR2
Ryanodine receptor 2.
    
 0.962
RYR1
Ryanodine receptor 1.
    
 0.952
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.941
ACVR1
Activin A receptor type 1.
    
 0.921
RYR3
Ryanodine receptor 3.
    
 0.907
MTOR
Mechanistic target of rapamycin kinase.
    
 
 0.886
ACVRL1
Activin A receptor like type 1.
    
 0.880
ENSCWAP00000022548
annotation not available
   
 0.833
ENSCWAP00000002207
annotation not available
    
   0.746
GTF2H1
General transcription factor IIH subunit 1.
    
   0.746
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.