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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF668Zinc finger protein 668. (618 aa)    
Predicted Functional Partners:
ZBTB45
Zinc finger and BTB domain containing 45.
   
   
0.771
ZNF428
Zinc finger protein 428.
      
 0.629
MIEN1
Migration and invasion enhancer 1.
    
 
 0.623
UBE3D
Ubiquitin protein ligase E3D.
      
 0.597
TRIM28
Tripartite motif containing 28.
    
 0.581
TRIM33
Tripartite motif containing 33.
    
 0.556
CHCHD10
Coiled-coil-helix-coiled-coil-helix domain containing 10.
      
 0.555
HDLBP
High density lipoprotein binding protein.
    
 
 0.547
HACD3
3-hydroxyacyl-CoA dehydratase 3.
    
 
 0.533
ZNF622
Zinc finger protein 622.
    
 
 0.532
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.