Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TOX4TOX high mobility group box family member 4. (620 aa)    
Predicted Functional Partners:
WDR82
WD repeat domain 82.
    
 0.966
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
    
 0.965
PPP1R10
Protein phosphatase 1 regulatory subunit 10.
    
 0.927
PPP1CC
Protein phosphatase 1 catalytic subunit gamma.
    
  0.875
TOX3
TOX high mobility group box family member 3.
   
  
 0.857
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.835
ENSCWAP00000009797
annotation not available
    
   0.813
ENSCWAP00000028687
annotation not available
    
   0.813
POLR1E
RNA polymerase I subunit E.
    
 0.756
ACTR8
Actin related protein 8.
    
 0.751
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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