STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SPATA3Spermatogenesis associated 3. (207 aa)    
Predicted Functional Partners:
WASL
WASP like actin nucleation promoting factor.
   
 
 0.779
WAS
WASP actin nucleation promoting factor.
   
 
 0.779
TMEM82
Transmembrane protein 82.
      
 0.754
SPATA21
Spermatogenesis associated 21.
    
 
 0.715
WIPF1
WAS/WASL interacting protein family member 1.
    
 
 0.701
WIPF2
WAS/WASL interacting protein family member 2.
    
 
 0.701
TEX43
Testis expressed 43.
      
 0.699
SPATS1
Spermatogenesis associated serine rich 1.
      
 0.697
GFRA1
GDNF family receptor alpha 1.
      
 0.696
ENSCWAP00000010027
annotation not available
      
 0.692
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.