STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MATN4Matrilin 4. (540 aa)    
Predicted Functional Partners:
COMP
Cartilage oligomeric matrix protein.
    
 0.939
LUM
Lumican.
   
 
 0.841
EPYC
Epiphycan.
   
 
 0.802
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.715
COL9A3
Collagen type IX alpha 3 chain.
   
 
 0.711
GAS2
Growth arrest specific 2.
    
 
 0.699
RBPJL
Recombination signal binding protein for immunoglobulin kappa J region like.
   
 0.687
MATN1
Matrilin 1.
   
 
0.673
CNMD
Chondromodulin.
   
 
 0.672
FRAS1
Fraser extracellular matrix complex subunit 1.
   
 0.665
Your Current Organism:
Catagonus wagneri
NCBI taxonomy Id: 51154
Other names: C. wagneri, Chacoan peccary
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.